Add Repository Intelligence Bootstrap: repo-bootstrap.sh, all 13 agents updated, docs, tests
- scripts/repo-bootstrap.sh: generic idempotent bootstrap tool (status/bootstrap/refresh)
- creates .opencode/ with repo-context, architecture, build-and-test, conventions, deployment skills
- relevance-based skill generation (only creates what the repo actually has)
- staleness detection via .bootstrap-meta (key=value, SHA-256 fingerprints)
- marker-based manual protection (never overwrites unmarked files)
- accepts --root flag for explicit repo targeting
- scripts/test-repo-bootstrap.sh: 11 tests covering all 10 acceptance criteria
- creation, idempotency, manual preservation, relevance detection
- orchestrator/agent structural checks, staleness, genericness
- install.sh workflow compatibility, malformed handling
- agents/orchestrator.md: first-class Repository Intelligence Bootstrap stage
- 10-step workflow, ownership rules table, staleness signals
- consumption rules, backward compatibility, fallback procedure
- All 12 subagent files: role-adapted Repository Intelligence section
- architect: owns architecture skill
- builder/tester: own build-and-test skill (shared)
- explorer: owns repo-context skill
- maintainer: owns conventions skill + audits .opencode/
- reviewer: validates consistency (consumer/reporter)
- designer/detective/philosopher/toolsmith/workflow-architect/writer: consume-only
- docs/REPOSITORY_INTELLIGENCE.md: full architecture documentation
- README.md: updated layout, bootstrap usage, requirements
- 13/13 agents installed, permission-engine verifier PASS
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